By Sucharita Dey, Bin Tean Teh. Cancer Science Institute of Singapore, NUS, Singapore on 27 May, 2014
Introduction: TET2 is found to be a frequently mutated gene in peripheral T cell lymphoma (PTCL) and angioimmunoblastic T cell lymphoma …
» OpenMP Speedup for Multi-objective Thermal Generation Scheduling
By Anupam Trivedi, Department of Electrical & Computer Engineering on 27 May, 2014
The day-ahead thermal generation scheduling comprises of two tasks: one is the unit commitment, which determines the on/off schedules of thermal …
» Data Intensive Research – Bigger, Faster, Cheaper
By Tan Chee Chiang, Computer Centre on 27 May, 2014
With more data being generated at a faster rate in areas such as biomedical, environmental, physical science and engineering, finance and …
» Acceleration of Molecular Dynamics Simulation Using Amber GPU Version
By Zhang Xinhuai, Computer Centre on 27 May, 2014
With the explosive growth of the number of GPU accelerated application in the last one to two years, General Purpose GPU …
» Calculation of Dynamic Amplification Factor During Offshore Lifting
By Koh Kai Ling, Chua Zhiqian, Koh Long Jie, Wilson Choo Chia Chye, Kng Wei An, Jerald Koh Shao Hong (Department of Mechanical Engineering) on 3 Jan, 2014
Introduction Our Group was tasked to find a solution for the reduction of Dynamic Amplification Factor (DAF) during offshore lifting that …
» Monte Carlo Simulation Using Matlab
By A researcher in Department of Economics on 3 Jan, 2014
Introduction Monte Carlo simulation is used to investigate the finite sample performance of estimators and test statistics. The computation tasks involve …
» Running Your Research Simulation in the Cloud?
By Wang Junhong on 3 Jan, 2014
Cloud computing refers to the on-demand delivery of IT resources via the Internet with pay-as-you-go pricing. Compared to the conventional in-house …
» Solving High-Dimensional Stochastic Inventory Problems with OpenMP on HPC – Phase II
By Wang Tong, Department of Decision Sciences on 26 Aug, 2013
The computing time is reduced from years to about five months by switching from GCC to Intel ICC compiler, checkpointing my …
» Benchmarking Open Source LAMMPS on Atlas6 Cluster
By Zhang Xinhuai, Computer Centre on 12 Apr, 2013
Benchmark results on atlas6 cluster for the open source LAMMPS shows that running parallel jobs using 12 threads, or running within …
» Parallel Molecular Dynamics Simulation of DNA Base Pair Opening by Sharp Bending
By Cong Pengwen and Yan Jie, Singapore-MIT Alliance, Mechanobiology Institute Singapore on 11 Apr, 2013
Molecular dynamics (MD) simulations were carried out to study the bending of a 20bp long B-DNA fragment with the force exerted …