Nmag Nmag is a micromagnetic simulation package. It has been developed at the University of Southampton with substantial contributions from Hans Fangohr, Thomas Fischbacher, Matteo Franchin. It is released under

MrBayes MrBayes is a program for the Bayesian estimation of phylogeny. Bayesian inference of phylogeny is based upon a quantity called the posterior probability distribution of trees, which is the probability

Molden Molden is a pre- and post-processing program of molecular and electronic structures. It can display molecular density from the ab initio packages GAMESS and GAUSSIAN, and the Semi-Empirical packages

MODELLER What is MODELLER? MODELLER is a program for comparative protein structure modeling by satisfaction of spatial restraints. It is used for homology or comparative modeling of protein 3D structures.

MeepIntroduction Meep implements the finite-difference time-domain (FDTD) method for computational electromagnetism.  The current version installed in SVU is 1.0.3.  More details on the Meep software can be found at the developer’s

Gamess GAMESS(General Atomic and Molecular Electronic Structure System) is a general ab initio quantum chemistry package. The current version available in our systems is 5 Dec 2014 version. To run

Autodock AutoDock is is a suite of automated docking tools. It is designed to predict how small molecules, such as substrates or drug candidates, bind to a receptor of known 3D